Yes it is because of a cheat, the cheat being Have All Quest Status & Equipment
This is not a glitch with PJ as it happens also on the Real.
Anyway, this has been moved here as it is cheat related.
but we can help you continue.
1st: go
Here to get the new upadate cheats for all Zelda OOT & MM.
included in the update is infinate Hover Boots & follow the instructions how to put them in your cht file.
2nd: go to the very top of the mountain where the fairy is,
Next to her entrance is another one in to the fire temple.
once inside put on the hover boots and infinite hover cheat to hover over to the ledge on the left hand side.
From here you can carry on the game as normal,
dont forget to untick the infinite hover cheat
